Cloud Pipeline Genomic data analysis software
Cloud Pipeline
Solution Overview
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Benefits
Democratizing the Cloud
Non-IT-savvy scientists can flexibly build and run pipelines/models in the cloud
Scalability
Pipeline instances are created on-demand — auto-scaled clusters are supported
Extensibility
Powerful API allows external systems to leverage Cloud Pipeline’s components
Minimize Vendor Lock-in Risks
Cloud-independent architecture supports any single cloud and multiple clouds
Security & Traceability
Support of single sign-on, access rights, encryption, logging & version control
Features
- User-friendly web interface for managing cloud infrastructure, accessing data storage and pipeline-building tools, and launching/managing interactive applications
- Support for multiple bioinformatics and modeling/simulation tools from an extensive library of Docker container images executed in the cloud
- A unified framework that allows for the use of different cloud platforms separately and together
- Possibility to build custom pipelines using a mixture of languages (including Shell script, Python, R, Java, Perl, WDL, etc.), and save them to a built-in, version-controlled repository
- Integration of cloud applications with on-premise applications (hybrid architecture)
- High scalability: support for thousands of users, utilizing thousands of nodes
- Management of data access permissions for both internal and external users
- Protecting data using encryption
- Support for various computation node and cluster configurations
Use Cases
Clinical Trial
Customer Problem:
A clinical trial sponsor faces challenges managing and analyzing vast amounts of clinical trial data. Their current system is:
- Inefficient: Data from various sources (hospitals, clinics, wearables) is siloed and requires manual integration.
- Time-consuming: Without proper genomics software, data cleaning and analysis are slow, delaying trial progress and regulatory submissions.
- Error-prone: Manual data handling increases the risk of errors and inconsistencies.
Proposed Solution:
The sponsor decides to start using EPAM Cloud Pipeline, genomics data analysis software, to:
- Develop automated workflows for data ingestion, cleaning, and analysis from diverse sources.
- Leverage the cloud's scalability to handle large datasets efficiently.
- Integrate with existing clinical trial management systems (CTMS) for seamless data flow.
- Employ machine learning for advanced analytics and real-time patient monitoring.
Achieved Results:
- Streamlined data management: Automated workflows improve data quality and reduce manual effort.
- Faster analysis: Cloud resources accelerate data processing, allowing for quicker insights.
- Improved data accuracy: The genomic analysis software reduced manual intervention and minimized errors and inconsistencies.
- Real-time insights: Machine learning enables proactive monitoring and informed decision-making.
- Faster trial completion: Efficient data management and analysis shorten trial timelines.
Awards
Cloud Security Alliance STAR Level 1
Proven compliance with the Cloud Controls Matrix cybersecurity framework.Questions & Answers
Can you install Cloud Pipeline on your own machine and use your own backend or is it solely on the cloud?
Posted on May 15, 2022 by James
Dear James,
Thanks for reaching out to us via https://solutionshub.epam.com/ and for your interest in Cloud Pipeline.
Cloud Pipeline has been designed specifically as a cloud-based solution to effectively use performance, flexibility, and availability of computing clouds. Right now, Cloud Pipeline supports AWS, Azure, and Google Cloud. So, please, try to find the way you may evaluate the product within its native environments.
We would be grateful if you could unveil what tasks you are considering for Cloud Pipeline, and how did you learn about the product?
Best wishes SolutionsHub Team
Posted on May 17, 2022 by SolutionsHub Support
Does Cloud Pipeline support workflow definition languages?
Posted on September 23, 2020 by Judy
Yes. Cloud Pipeline supports WDL/Cromwell, NextFlow, etc.
Posted on September 24, 2020 by SolutionsHub Support
Is Cloud Pipeline a SaaS solution?
Posted on September 16, 2020 by Alan
No. Cloud Pipeline is hosted in your cloud environment.
Posted on September 18, 2020 by SolutionsHub Support
Have a question? We are ready to help you.
type
license type
industries
categories
Integrates with
AWS
Azure
GCP
Docker
Kubernetes
Tech Requirements
Server
- AWS
- Azure
- GCP
Browser
- Google Chrome (best option)
- Firefox
- Microsoft EDGE
- Internet Explorer 11
Version
Updated on Sep, 2019
Documentation
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